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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848481.1_cds_XP_016510411.1_23249
CDS Infomation

[gene=LOC107827733] [db_xref=GeneID:107827733] [protein=alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like] [protein_id=XP_016510411.1] [location=join(25101..25313,26067..26297,27396..27566,27722..27865,27973..28152,28495..28720,28950..29063,29145..29231,29672..29715)] [gbkey=CDS]
Sequence

ATGGCGTTACAGAGGAAATTACTAAAAGGGTGTGCTGGAATTGCCAAATATAGGTGCCTG
GGGTACTTTCCCGGTCAAGCGGTGGTGGCGCCGCCGGAACTGCCGCCGTTTGACTACCAG
CCAAAGCCGTATAAAGGGCCTTTGGCTGATGAGGTTTTGGAGAAAAGAAAGAAGTTTCTG
GGTCCTTCCCTCTTCTACTACTACCAAAAACCTCTAAATATTGTTGAGGGGAAGATGCAA
TATTTGTATGATGAGAACGGAAGACGTTATCTTGATGCTTTTGCTGGAATAGTTACTGTC
TCATGCGGTCATTGTCATCCTATGGTGTTGGATGCCATCACGGAGCAAAGCAAGCTTCTC
CAACATGCTACAACCATATATCTACATCATGCGATCGGCGATTTTGCGGAAGCATTGGCA
TCTAAGATGCCAGGAAACCTAAAGGTAGTATATTTCGTAAATTCAGGGACAGAAGCAAAT
GAATTGGCAATGCTGATGGCACGATTGTACAGTGGTAACCTAAATATGATTGCCTTGAGG
AATGCATATCATGGCGGAAGTGCCAACACAATTGGGCTAACTGCTCTTAACACATGGAAG
TACCCTATTCCACAGGGTGAAATCCATCACGTTCTGAATCCTAACCCATATCGTGGAGTA
TTCGGATCTGACGCTAAACGATATGCTGAAGATGTACAGGATCACATTGATCATGGTACT
TCAGGAAAGGTTGCTGGTTTTATTGCTGAAACAATTCAGGGGGTTGGAGGAGCTGTTGAA
CTAGCCCCTGGATACTTGAAGTTGGTTTATGACATTGTTCGCAAAGCAGGAGGTGTTTGT
ATTGCTGATGAAGTACAAACTGGCTTTGGTCGCACAGGGAGCGACTACTGGGGTTTTGAG
ACACAGGGTGTGATTCCTGATATAGTTACAATGGCAAAGGGTATCGGAAATGGTTTGCCA
CTTGGAGCTGTTGTCACAACGCCAGAAATTGCTAGTGTTATGGCTCAAAAGATACAATTT
AATACATATGGGGGGAACCCTGTTTGCTCTGCTGGTGGGCATGCAGTACTCAGAGTAATC
GATAAGGAACAACGCCAAAAGCATTGTGCTGAGGTTGGCTCACACTTGATTGGGCGGCTG
AGGGATCTACAGAAAAGACATGACATAATTGGAGATGTGCGAGGCAGGGGTTTAATGGTT
GGTATCGAACTTGTAACTGACAGAAAAGAAAAGACACCCGCCAAGGCAGAAACTGGAGTT
CTCTTTGAGAAGCTTAGAGAACTTGGTGTTCTTGTAGGGAAAGGTGGTTTACATGGAAAT
GTTTTCAGAATAAAGCCTCCTATGTGTTTTGGCAAGGATGATGCAGACTTCTTAGTTGAT
GCATTGGACTATTCAATTTCAAAGTTGTGA

Peptide Sequence

PEP ID

XP_016510411.1
PEP Infomation

PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MALQRKLLKGCAGIAKYRCLGYFPGQAVVAPPELPPFDYQPKPYKGPLADEVLEKRKKFL
GPSLFYYYQKPLNIVEGKMQYLYDENGRRYLDAFAGIVTVSCGHCHPMVLDAITEQSKLL
QHATTIYLHHAIGDFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLYSGNLNMIALR
NAYHGGSANTIGLTALNTWKYPIPQGEIHHVLNPNPYRGVFGSDAKRYAEDVQDHIDHGT
SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSDYWGFE
TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIASVMAQKIQFNTYGGNPVCSAGGHAVLRVI
DKEQRQKHCAEVGSHLIGRLRDLQKRHDIIGDVRGRGLMVGIELVTDRKEKTPAKAETGV
LFEKLRELGVLVGKGGLHGNVFRIKPPMCFGKDDADFLVDALDYSISKL

Transcript Sequence

Gene sequence data has not been registered.